Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | ATN00_RS08155 | Not Available | Negative | 1630604 - 1632979 | 85338.4 |
| arm dna-binding domain-containing protein | ATN00_RS23640 | Not Available | Negative | 1633249 - 1633353 | 3852.81 |
| Trna-cys | Not Available | Not Available | Positive | 1633518 - 1633591 | Not Available |
| protein-l-isoaspartate o-methyltransferase | ATN00_RS08165 | Q2J302 | Positive | 1633784 - 1634416 | 22031.8 |
| tolc family outer membrane protein | ATN00_RS08170 | Q8G0Y6 | Positive | 1634430 - 1635911 | 51916.8 |
| duf2497 domain-containing protein | ATN00_RS08175 | Not Available | Positive | 1635978 - 1636484 | 17773.2 |
| s9 family peptidase | ATN00_RS08180 | B2RIT0 | Positive | 1636591 - 1638630 | 73255.6 |
| valine--trna ligase | ATN00_RS08185 | Q7X2N3 | Positive | 1638735 - 1641434 | 100914.0 |
| mate family efflux transporter | ATN00_RS08190 | O34474 | Positive | 1641473 - 1642930 | 50977.2 |
| atp-binding protein | ATN00_RS08195 | Q8U1P0 | Negative | 1642937 - 1644517 | 57849.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

