Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diaminopimelate decarboxylase | ATN00_RS08055 | Q9Z661 | Positive | 1606726 - 1607991 | 44349.1 |
| bifunctional precorrin-2 dehydrogenase/sirohydrochlorin ferrochelatase | ATN00_RS08060 | C1DKY7 | Positive | 1607991 - 1608758 | 27134.8 |
| response regulator | ATN00_RS08065 | Not Available | Negative | 1608755 - 1609333 | 21078.7 |
| tetr/acrr family transcriptional regulator | ATN00_RS08070 | Not Available | Negative | 1609453 - 1610109 | 23866.8 |
| efflux transporter outer membrane subunit | ATN00_RS08075 | Q8CVH8 | Positive | 1610197 - 1611711 | 53095.1 |
| emra/emrk family multidrug efflux transporter periplasmic adaptor subunit | ATN00_RS08080 | Not Available | Positive | 1611704 - 1612861 | 41061.1 |
| dha2 family efflux mfs transporter permease subunit | ATN00_RS08085 | P0AEJ1 | Positive | 1612873 - 1614405 | 55174.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | ATN00_RS08090 | Q2G9Z2 | Negative | 1614442 - 1615290 | 30130.9 |
| 4-hydroxythreonine-4-phosphate dehydrogenase pdxa | ATN00_RS08095 | Q5NMX3 | Negative | 1615280 - 1616305 | 35031.4 |
| peptidylprolyl isomerase | ATN00_RS08100 | Not Available | Negative | 1616283 - 1617668 | 49712.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

