Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| aromatic ring-hydroxylating dioxygenase subunit alpha | ATN00_RS07850 | Q9RBG5 | Negative | 1568065 - 1569282 | 46338.9 |
| tonb-dependent receptor | ATN00_RS07855 | Not Available | Negative | 1569506 - 1572190 | 95816.4 |
| sdr family nad(p)-dependent oxidoreductase | ATN00_RS07860 | Not Available | Negative | 1572977 - 1573807 | 29272.1 |
| metal-dependent hydrolase | ATN00_RS07865 | Not Available | Negative | 1573880 - 1574725 | 33529.3 |
| aromatic ring-hydroxylating dioxygenase subunit alpha | ATN00_RS07870 | D0C9N6 | Negative | 1574788 - 1576053 | 47555.6 |
| hypothetical protein | ATN00_RS07875 | Not Available | Negative | 1576087 - 1576434 | 13308.9 |
| hypothetical protein | ATN00_RS07880 | Not Available | Negative | 1576508 - 1576852 | 12969.5 |
| zinc-binding dehydrogenase | ATN00_RS07885 | P0DMQ6 | Negative | 1577087 - 1578112 | 36176.5 |
| tetr/acrr family transcriptional regulator | ATN00_RS23635 | Not Available | Positive | 1578347 - 1579021 | 25294.4 |
| nuclear transport factor 2 family protein | ATN00_RS07895 | Not Available | Positive | 1579185 - 1579586 | 15347.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

