Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-oxoacid coa-transferase subunit b | ATN00_RS07740 | P0A101 | Negative | 1547707 - 1548357 | 22878.7 |
| 3-oxoacid coa-transferase subunit a | ATN00_RS07745 | Q01103 | Negative | 1548372 - 1549061 | 23974.8 |
| iclr family transcriptional regulator c-terminal domain-containing protein | ATN00_RS07750 | Q52154 | Positive | 1549171 - 1549941 | 27888.1 |
| carboxymuconolactone decarboxylase family protein | ATN00_RS07755 | Not Available | Negative | 1549938 - 1550204 | 9816.87 |
| duf2155 domain-containing protein | ATN00_RS22800 | Not Available | Positive | 1551076 - 1552385 | 47068.5 |
| is21-like element helper atpase istb | ATN00_RS07770 | P55500 | Positive | 1552400 - 1553110 | 26100.2 |
| duf2155 domain-containing protein | ATN00_RS07775 | Q9HI37 | Negative | 1553169 - 1553468 | 11075.6 |
| hypothetical protein | ATN00_RS07780 | Not Available | Positive | 1553875 - 1554174 | 10927.3 |
| type iv secretion system dna-binding domain-containing protein | ATN00_RS07785 | P22708 | Positive | 1554171 - 1556270 | 77743.1 |
| mobf family relaxase | ATN00_RS07790 | P14565 | Positive | 1556267 - 1559233 | 109416.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

