Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3168 domain-containing protein | ATN00_RS17260 | Not Available | Negative | 3533249 - 3533656 | 14724.8 |
| hypothetical protein | ATN00_RS17265 | Not Available | Negative | 3533653 - 3533835 | 6214.49 |
| phage head-tail connector protein | ATN00_RS17270 | Not Available | Negative | 3533856 - 3534398 | 19198.2 |
| Minor tail protein | ATN00_RS17275 | Not Available | Negative | 3534395 - 3534673 | 10249.9 |
| Tail fiber protein | ATN00_RS17280 | Q04830 | Negative | 3534833 - 3536482 | 56413.6 |
| Putative major capsid protein | ATN00_RS17285 | Not Available | Negative | 3536553 - 3537680 | 39000.9 |
| Putative prohead protease | ATN00_RS17290 | Not Available | Negative | 3537782 - 3538216 | 15167.1 |
| duf6127 family protein | ATN00_RS17295 | Not Available | Negative | 3538213 - 3538533 | 11448.4 |
| hypothetical protein | ATN00_RS23755 | Not Available | Positive | 3538592 - 3538762 | 6369.99 |
| Portal protein | ATN00_RS17300 | Q1RIH4 | Negative | 3538759 - 3539889 | 39559.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

