Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2155 domain-containing protein | ATN00_RS07450 | Q9ZHC7 | Positive | 1476235 - 1476705 | 15907.7 |
| is110 family transposase | ATN00_RS07455 | Not Available | Negative | 1477061 - 1478176 | 41733.6 |
| tn3 family transposase | ATN00_RS07460 | Not Available | Positive | 1478580 - 1481489 | 109016.0 |
| recombinase family protein | ATN00_RS07465 | Not Available | Positive | 1481530 - 1482498 | 35758.8 |
| glutathione s-transferase family protein | ATN00_RS07470 | Q9P6M1 | Negative | 1482465 - 1483106 | 23950.0 |
| marr family winged helix-turn-helix transcriptional regulator | ATN00_RS07475 | O34777 | Negative | 1483129 - 1483581 | 16602.4 |
| organic hydroperoxide resistance protein | ATN00_RS07480 | Q49WG0 | Negative | 1483593 - 1484018 | 14273.1 |
| duf2155 domain-containing protein | ATN00_RS07485 | P03015 | Negative | 1484111 - 1484738 | 22676.7 |
| duf4158 domain-containing protein | ATN00_RS23925 | P06694 | Positive | 1484874 - 1485389 | 19084.3 |
| tn3 family transposase | ATN00_RS24150 | Not Available | Positive | 1485448 - 1487001 | 57247.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

