Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipoyl(octanoyl) transferase lipb | ATN00_RS06820 | Q1GTF8 | Negative | 1362097 - 1362789 | 24887.7 |
| hypothetical protein | ATN00_RS06825 | Not Available | Positive | 1362867 - 1363655 | 27232.2 |
| gnat family n-acetyltransferase | ATN00_RS06830 | Not Available | Negative | 1363669 - 1364253 | 21585.5 |
| oxygen-dependent coproporphyrinogen oxidase | ATN00_RS06835 | B0T8D1 | Negative | 1364259 - 1365110 | 31552.1 |
| trna (cytidine(34)-2'-o)-methyltransferase | ATN00_RS06840 | D7A3L6 | Negative | 1365107 - 1365565 | 16407.0 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | ATN00_RS06845 | P23136 | Positive | 1365773 - 1366339 | 20048.9 |
| cytochrome b/b6 | ATN00_RS06850 | P23134 | Positive | 1366351 - 1367643 | 48019.2 |
| cytochrome c1 | ATN00_RS06855 | P23135 | Positive | 1367659 - 1368507 | 31068.1 |
| adenine phosphoribosyltransferase | ATN00_RS06860 | Q1GTG6 | Positive | 1368584 - 1369120 | 18644.8 |
| 5'-methylthioadenosine/s-adenosylhomocysteine nucleosidase | ATN00_RS06865 | Not Available | Negative | 1369098 - 1369727 | 22434.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

