Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS00550 | Not Available | Positive | 104409 - 105080 | 24723.4 |
| Gp6, major capsid head protein | ATN00_RS00555 | Not Available | Positive | 105232 - 106542 | 45747.2 |
| Putative prohead protease | ATN00_RS00560 | Not Available | Positive | 106539 - 107057 | 18397.9 |
| Phage portal protein, hk97 family | ATN00_RS00565 | P49859 | Positive | 107054 - 108244 | 43671.0 |
| head-tail connector protein | ATN00_RS00570 | Not Available | Positive | 108241 - 108507 | 9584.75 |
| alpa family transcriptional regulator | ATN00_RS23245 | Not Available | Positive | 108507 - 108752 | 9151.63 |
| Attr | Not Available | Not Available | Positive | 108631 - 108643 | Not Available |
| Integrase | ATN00_RS00580 | Not Available | Positive | 108734 - 109813 | 39970.3 |
| Trna-glu; | Not Available | Not Available | Positive | 109831 - 109906 | Not Available |
| Recj | ATN00_RS00590 | P39693 | Negative | 110006 - 111772 | 61764.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

