Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2171 domain-containing protein | ATN00_RS06420 | Not Available | Negative | 1292752 - 1293003 | 8727.12 |
| ribonucleotide-diphosphate reductase subunit beta | ATN00_RS06425 | Q91FE8 | Positive | 1293114 - 1294169 | 40930.0 |
| glycine zipper 2tm domain-containing protein | ATN00_RS06430 | Not Available | Positive | 1294445 - 1294948 | 18911.4 |
| lysr family transcriptional regulator | ATN00_RS06435 | Not Available | Negative | 1295094 - 1296011 | 32759.4 |
| Trna-gly | Not Available | Not Available | Positive | 1296124 - 1296197 | Not Available |
| rida family protein | ATN00_RS06445 | O30825 | Negative | 1296371 - 1296718 | 12172.6 |
| maleylacetoacetate isomerase | ATN00_RS06450 | O86043 | Negative | 1296883 - 1297524 | 23542.4 |
| fumarylacetoacetase | ATN00_RS06455 | P25093 | Negative | 1297526 - 1298836 | 47146.0 |
| voc family protein | ATN00_RS06460 | Not Available | Negative | 1298836 - 1299378 | 20612.4 |
| marr family winged helix-turn-helix transcriptional regulator | ATN00_RS06465 | Not Available | Positive | 1299490 - 1299939 | 16664.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

