Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lps export abc transporter periplasmic protein lptc | ATN00_RS06210 | Not Available | Negative | 1253404 - 1254051 | 23563.2 |
| ribonuclease d | ATN00_RS06215 | Not Available | Negative | 1254077 - 1254694 | 23071.8 |
| cold-shock protein | ATN00_RS24260 | Not Available | Positive | 1254944 - 1255759 | 27502.9 |
| prolyl aminopeptidase | ATN00_RS06225 | O32449 | Negative | 1256006 - 1256947 | 35134.4 |
| is5 family transposase | ATN00_RS22775 | Not Available | Positive | 1257098 - 1257855 | 29052.3 |
| tonb-dependent receptor | ATN00_RS06240 | Not Available | Positive | 1257922 - 1260690 | 96715.8 |
| bifunctional diguanylate cyclase/phosphodiesterase | ATN00_RS06245 | Not Available | Negative | 1260853 - 1263456 | 95071.6 |
| dna polymerase iii subunit beta | ATN00_RS06250 | P0CAU5 | Negative | 1263549 - 1264661 | 40117.3 |
| hypothetical protein | ATN00_RS06255 | Not Available | Positive | 1264834 - 1265325 | 17258.0 |
| 23s rrna (adenine(2503)-c(2))-methyltransferase rlmn | ATN00_RS06260 | Q2G8E3 | Positive | 1265435 - 1266694 | 46494.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

