Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent succinate-semialdehyde dehydrogenase | ATN00_RS06160 | P25526 | Positive | 1241367 - 1242833 | 51842.3 |
| sugar mfs transporter | ATN00_RS06165 | Q2YIJ8 | Positive | 1243006 - 1244292 | 44613.8 |
| hded family acid-resistance protein | ATN00_RS06170 | Not Available | Negative | 1244293 - 1244874 | 20702.4 |
| hamp domain-containing sensor histidine kinase | ATN00_RS06175 | Q9ZHD4 | Negative | 1245017 - 1246414 | 49930.3 |
| response regulator transcription factor | ATN00_RS06180 | P0AD00 | Negative | 1246398 - 1247093 | 25523.9 |
| pdz domain-containing protein | ATN00_RS06185 | Not Available | Negative | 1247090 - 1247512 | 14729.7 |
| glycosyltransferase | ATN00_RS06190 | Q81AF4 | Negative | 1247509 - 1250856 | 121273.0 |
| magnesium/cobalt transporter cora | ATN00_RS06195 | Q9WZ31 | Positive | 1251038 - 1252003 | 36294.1 |
| peptidylprolyl isomerase | ATN00_RS06200 | P42693 | Positive | 1252144 - 1252761 | 21999.9 |
| lpta/osta family protein | ATN00_RS06205 | Not Available | Negative | 1252841 - 1253404 | 19155.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

