Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf2061 domain-containing protein | ATN00_RS05910 | Not Available | Negative | 1194980 - 1195258 | 10245.3 |
| ll-diaminopimelate aminotransferase | ATN00_RS05915 | O87320 | Negative | 1195387 - 1196595 | 43814.8 |
| alpha/beta hydrolase | ATN00_RS05920 | O66392 | Positive | 1196737 - 1198476 | 64249.6 |
| phasin family protein | ATN00_RS05925 | Not Available | Positive | 1198609 - 1199463 | 29496.0 |
| hemerythrin domain-containing protein | ATN00_RS05930 | Not Available | Negative | 1199619 - 1200083 | 18079.0 |
| hypothetical protein | ATN00_RS05935 | Not Available | Negative | 1200144 - 1200509 | 13165.5 |
| 30s ribosomal protein s21 | ATN00_RS05940 | Q5NLS3 | Positive | 1200842 - 1201048 | 8257.16 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | ATN00_RS05945 | O08437 | Positive | 1201121 - 1201684 | 19596.5 |
| ai-2e family transporter | ATN00_RS05950 | Not Available | Negative | 1201738 - 1202823 | 38795.1 |
| signal peptidase i | ATN00_RS05955 | Not Available | Negative | 1202846 - 1203742 | 32767.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

