Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| na+/h+ antiporter nhaa | ATN00_RS05660 | A5V7M2 | Negative | 1146039 - 1147235 | 41172.6 |
| urocanate hydratase | ATN00_RS05665 | A5VFA2 | Negative | 1147451 - 1149115 | 60522.5 |
| n-formylglutamate deformylase | ATN00_RS05670 | Q9HU92 | Negative | 1149112 - 1149930 | 30083.6 |
| histidine ammonia-lyase | ATN00_RS05675 | P58082 | Negative | 1149927 - 1151453 | 52878.9 |
| imidazolonepropionase | ATN00_RS05680 | A5VFA5 | Negative | 1151450 - 1152649 | 42480.1 |
| formimidoylglutamate deiminase | ATN00_RS05685 | Q9HU77 | Positive | 1152737 - 1154092 | 49065.3 |
| histidine utilization repressor | ATN00_RS05690 | Not Available | Positive | 1154089 - 1154808 | 26939.1 |
| low molecular weight protein-tyrosine-phosphatase | ATN00_RS05695 | P41893 | Negative | 1154848 - 1155321 | 17208.2 |
| atp-binding protein | ATN00_RS05700 | Not Available | Negative | 1155318 - 1156772 | 52071.9 |
| phosphoenolpyruvate carboxylase | ATN00_RS05705 | Q5P7H5 | Positive | 1156883 - 1159585 | 98261.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

