Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| is110 family transposase | ATN00_RS22095 | P55626 | Negative | 52171 - 53286 | 41733.6 |
| tn3 family transposase | ATN00_RS22100 | P06694 | Negative | 53363 - 56341 | 109584.0 |
| recombinase family protein | ATN00_RS24135 | Not Available | Negative | 56346 - 56477 | 4393.36 |
| tonb-dependent receptor | ATN00_RS22105 | P46359 | Positive | 56884 - 59412 | 90286.9 |
| sdr family nad(p)-dependent oxidoreductase | ATN00_RS22110 | A0A1L5BUG8 | Negative | 59493 - 60248 | 25222.3 |
| recombinase family protein | ATN00_RS22115 | P55559 | Negative | 60331 - 61197 | 32170.6 |
| is6-like element is6100 family transposase | ATN00_RS22120 | P0C1L0 | Positive | 61480 - 62244 | 29684.0 |
| m1 family metallopeptidase | ATN00_RS22125 | Q59KZ1 | Negative | 62311 - 63660 | 49356.8 |
| recombinase family protein | ATN00_RS22130 | P18358 | Negative | 63726 - 64322 | 21756.2 |
| mu transposase c-terminal domain-containing protein | ATN00_RS22135 | P18416 | Positive | 64471 - 65952 | 55082.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

