Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS05415 | Not Available | Positive | 1090840 - 1091844 | 36661.2 |
| sulfotransferase domain-containing protein | ATN00_RS05420 | Not Available | Positive | 1091980 - 1092840 | 32798.2 |
| response regulator transcription factor | ATN00_RS05425 | Not Available | Positive | 1092892 - 1093671 | 28842.3 |
| redox-sensitive transcriptional activator soxr | ATN00_RS05430 | P0ACS3 | Negative | 1093675 - 1094124 | 16376.9 |
| efflux rnd transporter periplasmic adaptor subunit | ATN00_RS05435 | D2BTK6 | Positive | 1094297 - 1095355 | 37546.6 |
| efflux rnd transporter permease subunit | ATN00_RS05440 | Q57124 | Positive | 1095361 - 1098438 | 109710.0 |
| efflux transporter outer membrane subunit | ATN00_RS05445 | Not Available | Positive | 1098431 - 1099906 | 51384.6 |
| dj-1/pfpi family protein | ATN00_RS05450 | Not Available | Positive | 1099869 - 1100501 | 22553.4 |
| amino acid permease | ATN00_RS05455 | O07576 | Negative | 1100545 - 1102161 | 55670.9 |
| peptidoglycan editing factor pgef | ATN00_RS05460 | Q92HU9 | Positive | 1102316 - 1103077 | 26872.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

