Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pig-l deacetylase family protein | ATN00_RS05315 | Not Available | Negative | 1065724 - 1066410 | 24815.9 |
| formyltransferase family protein | ATN00_RS05320 | A8LE22 | Negative | 1066414 - 1067328 | 32887.3 |
| sugar transferase | ATN00_RS05325 | P71062 | Negative | 1067306 - 1067896 | 21400.0 |
| glycosyltransferase family 4 protein | ATN00_RS05330 | Not Available | Negative | 1067896 - 1069062 | 43170.9 |
| asparagine synthase (glutamine-hydrolyzing) | ATN00_RS05335 | P64248 | Negative | 1069059 - 1071017 | 72284.8 |
| glycosyltransferase | ATN00_RS05340 | Not Available | Negative | 1071005 - 1072198 | 42785.1 |
| nucleoside-diphosphate sugar epimerase/dehydratase | ATN00_RS05345 | P71052 | Positive | 1072653 - 1074674 | 73901.4 |
| degt/dnrj/eryc1/strs aminotransferase family protein | ATN00_RS05350 | Q9A9H3 | Positive | 1074701 - 1075903 | 43528.1 |
| o-antigen ligase | ATN00_RS05355 | Not Available | Positive | 1075900 - 1077264 | 49231.3 |
| polysaccharide biosynthesis/export family protein | ATN00_RS05360 | Q02728 | Positive | 1077261 - 1077830 | 20151.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

