Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repb c-terminal domain-containing protein | ATN00_RS05270 | Not Available | Negative | 1054238 - 1055272 | 38445.6 |
| plasmid partitioning protein repb c-terminal domain-containing protein | ATN00_RS05275 | Not Available | Negative | 1055181 - 1056080 | 33430.9 |
| recombinase family protein | ATN00_RS05280 | Not Available | Negative | 1056080 - 1057357 | 48230.3 |
| is21-like element isssp5 family helper atpase istb | ATN00_RS05285 | Not Available | Negative | 1057453 - 1058220 | 28898.4 |
| is21 family transposase | ATN00_RS05290 | Not Available | Negative | 1058217 - 1059710 | 56850.1 |
| sdr family oxidoreductase | ATN00_RS23880 | Not Available | Positive | 1059756 - 1059932 | 6372.53 |
| response regulator transcription factor | ATN00_RS05295 | P31802 | Negative | 1060007 - 1060693 | 24788.0 |
| wzz/fepe/etk n-terminal domain-containing protein | ATN00_RS05300 | P58593 | Positive | 1061048 - 1063312 | 81257.5 |
| lipopolysaccharide biosynthesis protein | ATN00_RS05305 | Not Available | Negative | 1063321 - 1064718 | 50721.6 |
| response regulator transcription factor | ATN00_RS05310 | P29369 | Negative | 1064768 - 1065289 | 18957.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

