Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dead/deah box helicase | ATN00_RS05125 | P54509 | Negative | 1016433 - 1019198 | 101675.0 |
| dead/deah box helicase | ATN00_RS05130 | P50830 | Negative | 1019200 - 1024380 | 191149.0 |
| wyl domain-containing protein | ATN00_RS05135 | Not Available | Negative | 1024377 - 1025267 | 33470.6 |
| duf2155 domain-containing protein | ATN00_RS05140 | Q46087 | Positive | 1025482 - 1026320 | 30586.4 |
| helix-turn-helix domain-containing protein | ATN00_RS05145 | Not Available | Negative | 1026508 - 1026711 | 7822.39 |
| hypothetical protein | ATN00_RS05150 | Not Available | Positive | 1026832 - 1027686 | 31714.6 |
| hypothetical protein | ATN00_RS05155 | Not Available | Positive | 1027683 - 1028783 | 41002.2 |
| phage terminase large subunit | ATN00_RS05160 | Not Available | Negative | 1028799 - 1030241 | 55261.7 |
| duf5681 domain-containing protein | ATN00_RS05165 | Not Available | Negative | 1030234 - 1030644 | 15278.0 |
| dna modification methylase | ATN00_RS05170 | Not Available | Negative | 1030637 - 1032103 | 53985.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

