Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sdr family oxidoreductase | ATN00_RS05080 | P40397 | Positive | 1004063 - 1004914 | 30146.6 |
| Trna-ser | Not Available | Not Available | Positive | 1005058 - 1005148 | Not Available |
| recombinase family protein | ATN00_RS05090 | P06693 | Negative | 1005786 - 1007447 | 61096.6 |
| duf2924 domain-containing protein | ATN00_RS05095 | Not Available | Negative | 1007444 - 1007866 | 15342.8 |
| duf3489 domain-containing protein | ATN00_RS05100 | Not Available | Negative | 1007863 - 1008399 | 19017.6 |
| hypothetical protein | ATN00_RS05105 | Not Available | Positive | 1008541 - 1008846 | 11336.5 |
| hypothetical protein | ATN00_RS24185 | Not Available | Positive | 1009082 - 1009207 | 4187.86 |
| hnh endonuclease | ATN00_RS05110 | Not Available | Negative | 1009217 - 1009981 | 28031.4 |
| hypothetical protein | ATN00_RS05115 | Not Available | Negative | 1009995 - 1011971 | 72184.1 |
| eco57i restriction-modification methylase domain-containing protein | ATN00_RS05120 | Q60301 | Negative | 1011955 - 1016430 | 166040.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

