Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trbi/virb10 family protein | ATN00_RS22045 | P54917 | Positive | 44689 - 46038 | 45994.6 |
| p-type conjugative transfer protein trbj | ATN00_RS22050 | Not Available | Positive | 46064 - 46819 | 26735.5 |
| eexn family lipoprotein | ATN00_RS22055 | Not Available | Positive | 46829 - 47071 | 8646.29 |
| p-type conjugative transfer protein trbl | ATN00_RS22060 | Not Available | Positive | 47082 - 48797 | 54661.9 |
| transglycosylase slt domain-containing protein | ATN00_RS22065 | Not Available | Positive | 48800 - 49912 | 39799.1 |
| hypothetical protein | ATN00_RS22070 | Not Available | Negative | 49933 - 50232 | 11228.3 |
| hypothetical protein | ATN00_RS22075 | Not Available | Negative | 50225 - 50467 | 8804.27 |
| helix-turn-helix domain-containing protein | ATN00_RS22080 | Not Available | Negative | 50467 - 50793 | 11793.3 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS22085 | Not Available | Negative | 50790 - 51164 | 13961.4 |
| hypothetical protein | ATN00_RS22090 | Not Available | Positive | 51586 - 51840 | 9599.32 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

