Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cupin domain-containing protein | ATN00_RS04880 | Not Available | Positive | 959205 - 959543 | 12005.2 |
| nitric-oxide reductase large subunit | ATN00_RS04885 | Q59647 | Positive | 959591 - 961834 | 83664.0 |
| nnrs family protein | ATN00_RS04890 | Not Available | Positive | 961837 - 963039 | 42268.9 |
| conjugal transfer protein trad | ATN00_RS04895 | Not Available | Negative | 963067 - 963348 | 10256.3 |
| conjugal transfer protein trad | ATN00_RS04900 | Not Available | Negative | 963350 - 963676 | 11104.0 |
| ti-type conjugative transfer relaxase traa | ATN00_RS04905 | Q44349 | Positive | 963848 - 966847 | 111263.0 |
| alpa family transcriptional regulator | ATN00_RS04910 | Not Available | Positive | 966985 - 967206 | 8401.99 |
| hypothetical protein | ATN00_RS04915 | Not Available | Positive | 967193 - 967462 | 9801.15 |
| duf1778 domain-containing protein | ATN00_RS04920 | P43995 | Positive | 967509 - 967799 | 10635.9 |
| gnat family n-acetyltransferase | ATN00_RS04925 | Not Available | Positive | 967796 - 968311 | 18750.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

