Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| histidine phosphatase family protein | ATN00_RS04775 | Not Available | Positive | 939205 - 939786 | 20273.3 |
| adenosylcobinamide-gdp ribazoletransferase | ATN00_RS04780 | Not Available | Positive | 939783 - 940523 | 26090.5 |
| threonine-phosphate decarboxylase cobd | ATN00_RS04785 | Not Available | Positive | 940520 - 941503 | 35103.1 |
| adenosylcobinamide-phosphate synthase cbib | ATN00_RS04790 | Not Available | Positive | 941496 - 942434 | 33555.6 |
| cobyric acid synthase | ATN00_RS04795 | Q2GBK2 | Positive | 942422 - 943615 | 41562.3 |
| bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase | ATN00_RS04800 | P29931 | Positive | 943612 - 944139 | 18506.6 |
| dna-binding protein | ATN00_RS04805 | Not Available | Negative | 944182 - 944505 | 11709.1 |
| type ii toxin-antitoxin system rele/pare family toxin | ATN00_RS04810 | Not Available | Negative | 944510 - 944848 | 12556.9 |
| site-specific integrase | ATN00_RS04815 | Not Available | Negative | 944904 - 946172 | 45654.5 |
| llm class flavin-dependent oxidoreductase | ATN00_RS04820 | O53565 | Negative | 946663 - 947772 | 39898.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

