Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cobalt-precorrin-6a reductase | ATN00_RS04725 | O68098 | Negative | 931265 - 932038 | 27331.1 |
| bifunctional cobalt-precorrin-7 (c(5))-methyltransferase/cobalt-precorrin-6b (c(15))-methyltransferase | ATN00_RS04730 | P21921 | Positive | 932037 - 933257 | 42887.0 |
| cobalamin biosynthesis protein | ATN00_RS04735 | Not Available | Positive | 933254 - 933619 | 11706.2 |
| precorrin-4 c(11)-methyltransferase | ATN00_RS04740 | O68100 | Positive | 933616 - 934401 | 27504.0 |
| cobyrinate a,c-diamide synthase | ATN00_RS04745 | O68108 | Positive | 934398 - 935741 | 47012.3 |
| precorrin-6a synthase (deacetylating) | ATN00_RS04750 | P21636 | Positive | 935738 - 936502 | 27425.3 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | ATN00_RS04755 | Q9I472 | Positive | 936492 - 937118 | 22793.7 |
| 5,6-dimethylbenzimidazole synthase | ATN00_RS04760 | Q2RNG5 | Positive | 937115 - 937762 | 24198.9 |
| duf1636 domain-containing protein | ATN00_RS04765 | Not Available | Positive | 937788 - 938195 | 14640.3 |
| nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase | ATN00_RS04770 | Not Available | Positive | 938192 - 939208 | 33742.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

