Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS04670 | Not Available | Positive | 917370 - 917549 | 6696.1 |
| tonb-dependent siderophore receptor | ATN00_RS04675 | Q01674 | Positive | 917987 - 920128 | 77509.7 |
| peptidase | ATN00_RS04680 | Not Available | Positive | 920074 - 921699 | 59711.0 |
| hoxn/hupn/nixa family nickel/cobalt transporter | ATN00_RS04685 | P23516 | Positive | 921696 - 922736 | 37174.1 |
| cobalamin biosynthesis protein cobw | ATN00_RS04695 | Not Available | Positive | 923686 - 924738 | 37466.9 |
| cobaltochelatase subunit cobn | ATN00_RS04700 | P29929 | Positive | 924748 - 928053 | 117477.0 |
| precorrin-3b synthase | ATN00_RS04705 | P21637 | Positive | 928050 - 929180 | 39989.3 |
| precorrin-8x methylmutase | ATN00_RS04710 | Q9HZU2 | Positive | 929180 - 929809 | 21500.0 |
| precorrin-2 c(20)-methyltransferase | ATN00_RS04715 | P21639 | Positive | 929818 - 930543 | 26056.7 |
| precorrin-3b c(17)-methyltransferase | ATN00_RS04720 | P21640 | Positive | 930540 - 931301 | 26760.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

