Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbe | ATN00_RS04570 | Not Available | Positive | 893812 - 896301 | 90873.2 |
| p-type conjugative transfer protein trbj | ATN00_RS04575 | Not Available | Positive | 896298 - 897014 | 25308.8 |
| putative entry exclusion protein trbk-alt | ATN00_RS04580 | Not Available | Positive | 897023 - 897325 | 10549.5 |
| p-type conjugative transfer protein trbl | ATN00_RS04585 | Not Available | Positive | 897322 - 898686 | 44743.6 |
| conjugal transfer protein trbf | ATN00_RS04590 | Not Available | Positive | 898693 - 899376 | 25383.1 |
| p-type conjugative transfer protein trbg | ATN00_RS04595 | Not Available | Positive | 899373 - 900383 | 35838.8 |
| trbi/virb10 family protein | ATN00_RS04600 | Not Available | Positive | 900380 - 901585 | 42384.6 |
| duf2274 domain-containing protein | ATN00_RS04605 | Not Available | Positive | 901582 - 901803 | 8053.95 |
| hypothetical protein | ATN00_RS04610 | Not Available | Negative | 901822 - 902130 | 10696.9 |
| lysr family transcriptional regulator | ATN00_RS04615 | Q9X725 | Negative | 902127 - 903074 | 35229.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

