Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS04520 | Not Available | Negative | 886151 - 886525 | 14156.3 |
| usg protein | ATN00_RS04525 | P12288 | Negative | 886522 - 886791 | 10557.5 |
| hypothetical protein | ATN00_RS04530 | Not Available | Negative | 886788 - 887024 | 8705.4 |
| co-chaperone groes | ATN00_RS04535 | Q98II0 | Positive | 887275 - 887589 | 11286.6 |
| chaperonin groel | ATN00_RS04540 | Q1GRD4 | Positive | 887645 - 889264 | 57333.8 |
| conjugal transfer protein trag | ATN00_RS04545 | Not Available | Positive | 889632 - 891662 | 74557.8 |
| copg family ribbon-helix-helix protein | ATN00_RS04550 | Not Available | Positive | 891659 - 892078 | 15796.8 |
| p-type conjugative transfer atpase trbb | ATN00_RS04555 | Not Available | Positive | 892219 - 893205 | 34573.1 |
| trbc/virb2 family protein | ATN00_RS04560 | Not Available | Positive | 893202 - 893537 | 11504.3 |
| virb3 family type iv secretion system protein | ATN00_RS04565 | Not Available | Positive | 893534 - 893815 | 9958.31 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

