Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS21995 | Not Available | Negative | 35978 - 36256 | 10309.2 |
| duf2274 domain-containing protein | ATN00_RS22000 | Not Available | Negative | 36331 - 36573 | 8913.71 |
| hypothetical protein | ATN00_RS22005 | Not Available | Negative | 36577 - 36903 | 12122.6 |
| trbi/virb10 family protein | ATN00_RS22010 | P55406 | Negative | 36963 - 38063 | 38857.7 |
| tn3 family transposase | ATN00_RS22015 | Q06238 | Positive | 38229 - 41102 | 107219.0 |
| is6-like element is6100 family transposase | ATN00_RS22020 | Not Available | Negative | 41121 - 41885 | 29684.0 |
| recombinase family protein | ATN00_RS22025 | P54910 | Positive | 41948 - 42175 | 8000.47 |
| virb8/trbf family protein | ATN00_RS22030 | P55403 | Positive | 42162 - 42881 | 26275.5 |
| p-type conjugative transfer protein trbg | ATN00_RS22035 | P55404 | Positive | 42899 - 43882 | 35352.9 |
| spor domain-containing protein | ATN00_RS22040 | Not Available | Positive | 43885 - 44658 | 26926.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

