Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| s26 family signal peptidase | ATN00_RS04415 | Not Available | Positive | 867813 - 868391 | 20696.2 |
| duf736 domain-containing protein | ATN00_RS04420 | Not Available | Positive | 868372 - 868704 | 12459.5 |
| lytic transglycosylase domain-containing protein | ATN00_RS04425 | Not Available | Positive | 868708 - 869598 | 30863.7 |
| vird2 family relaxase/mobilization nuclease | ATN00_RS04430 | Not Available | Positive | 869858 - 871588 | 63876.9 |
| saved domain-containing protein | ATN00_RS04435 | Not Available | Negative | 871804 - 872973 | 42533.7 |
| mov34/mpn/pad-1 family protein | ATN00_RS04440 | Not Available | Negative | 872877 - 873353 | 18007.5 |
| thif family adenylyltransferase | ATN00_RS04445 | Not Available | Negative | 873343 - 875079 | 62849.5 |
| nucleotidyltransferase | ATN00_RS04450 | Not Available | Negative | 875076 - 876290 | 44926.1 |
| is5 family transposase | ATN00_RS22765 | Not Available | Negative | 876447 - 877204 | 29052.3 |
| hypothetical protein | ATN00_RS04465 | Not Available | Negative | 877249 - 878151 | 34304.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

