Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium wenxiniae |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium baderi strain DE-13 plasmid pDE4, complete sequence.
Gene Summary
Adenine Count
8144 bp
Thymine Count
8034 bp
Guanine Count
13530 bp
Cytosine Count
13968 bp
Genome Length
43676 bp
Protein-coding Genes
43 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
7
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | ATN00_RS04315 | Not Available | Positive | 851229 - 851426 | 7311.77 |
| nucleoside triphosphate pyrophosphohydrolase family protein | ATN00_RS04320 | Not Available | Positive | 851426 - 852604 | 43803.4 |
| uracil-dna glycosylase | ATN00_RS04325 | Not Available | Positive | 852601 - 853305 | 25736.0 |
| hypothetical protein | ATN00_RS04330 | Not Available | Negative | 853272 - 854051 | 28708.6 |
| c1 family peptidase | ATN00_RS04335 | Not Available | Negative | 854023 - 854703 | 24232.6 |
| imma/irre family metallo-endopeptidase | ATN00_RS04340 | Not Available | Negative | 854709 - 855719 | 37647.0 |
| helix-turn-helix domain-containing protein | ATN00_RS04345 | Not Available | Negative | 855722 - 856096 | 14117.6 |
| hypothetical protein | ATN00_RS04350 | Not Available | Negative | 856093 - 856431 | 12050.0 |
| parb/repb/spo0j family partition protein | ATN00_RS04355 | Not Available | Positive | 856913 - 858994 | 75943.7 |
| tigr02391 family protein | ATN00_RS04360 | Not Available | Negative | 859099 - 859899 | 29343.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

