Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TKS |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. TKS chromosome 1, complete sequence.
Gene Summary
Adenine Count
776115 bp
Thymine Count
780087 bp
Guanine Count
1350762 bp
Cytosine Count
1342893 bp
Genome Length
4249857 bp
Protein-coding Genes
4162 genes
Non-Coding Genes
102 genes
# of Chromosomes/Plasmids
11
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| conjugal transfer protein trbf | K426_RS03535 | Not Available | Negative | 680111 - 680800 | 25330.1 |
| p-type conjugative transfer protein trbl | K426_RS03540 | Not Available | Negative | 680803 - 682140 | 44204.5 |
| putative entry exclusion protein trbk-alt | K426_RS03545 | Not Available | Negative | 682143 - 682433 | 10294.1 |
| p-type conjugative transfer protein trbj | K426_RS03550 | Not Available | Negative | 682443 - 683216 | 27254.4 |
| conjugal transfer protein trbe | K426_RS03555 | Not Available | Negative | 683213 - 685651 | 88791.6 |
| virb3 family type iv secretion system protein | K426_RS03560 | Not Available | Negative | 685662 - 685943 | 9774.32 |
| aminotransferase | K426_RS03565 | Not Available | Negative | 685988 - 686275 | 9993.41 |
| p-type conjugative transfer atpase trbb | K426_RS03570 | Not Available | Negative | 686272 - 687258 | 34526.8 |
| helix-turn-helix transcriptional regulator | K426_RS03575 | Not Available | Positive | 687652 - 687987 | 12479.4 |
| type ii toxin-antitoxin system hipa family toxin | K426_RS03580 | Not Available | Positive | 687977 - 689377 | 51672.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

