Sphingobium sp. TKS

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Sphingomonadales

Family

Sphingobiaceae

Genus

Sphingobium

Description

Sphingobium sp. TKS is a flagellated bacterium characterized by its possession of true flagella, which likely aids in its motility and environmental adaptability. The organism is notable for having 11 replicons, suggesting a complex genomic structure that may contribute to its versatility in various ecological niches. The genomic data for Sphingobium sp. TKS is represented by multiple accession numbers, including NZ_CP005083.1, NZ_CP005085.1, NZ_CP005089.1, NZ_CP005084.1, NZ_CP005088.1, NZ_CP005090.1, NZ_CP005086.1, NZ_CP005087.1, NZ_CP005091.1, NZ_CP005092.1, and NZ_CP005093.1. These accession numbers indicate that the organism's genetic material has been sequenced and deposited in public databases, enabling further research into its biological characteristics and potential applications. The presence of flagella suggests that Sphingobium sp. TKS may be adapted to environments where mobility is advantageous, such as in diverse aquatic ecosystems or in soil environments where it can interact with various substrates. The complex structure indicated by the number of replicons may also facilitate metabolic flexibility, allowing this bacterium to thrive in conditions where specific nutrients or energy sources are limited. Thus, Sphingobium sp. TKS potentially plays a significant role in nutrient cycling and biodegradation processes, contributing to ecosystem health and stability.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderSphingomonadales
FamilySphingobiaceae
GenusSphingobium
SpeciesSphingobium sp. TKS
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Gene Summary

Adenine Count

1853 bp

Thymine Count

1952 bp

Guanine Count

2719 bp

Cytosine Count

3061 bp

Genome Length

9585 bp

Protein-coding Genes

12 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

11

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
AttlNot AvailableNot AvailablePositive265945 - 265958Not Available
site-specific integraseK426_RS01290Not AvailablePositive269110 - 27045950487.4
hypothetical proteinK426_RS01295Not AvailablePositive270456 - 27224364746.2
integraseK426_RS01300Not AvailablePositive272240 - 27440279640.3
Putative ardc-like antirestriction proteinK426_RS01305Not AvailablePositive274572 - 27543831416.4
hypothetical proteinK426_RS32815Not AvailableNegative275523 - 2756544651.56
Putative ardc-like antirestriction proteinK426_RS30005Not AvailablePositive275814 - 2759936234.48
CysmK426_RS01315Not AvailableNegative276059 - 27698531336.8
hypothetical proteinK426_RS01320Not AvailablePositive277150 - 27741910008.9
Reverse transcriptaseK426_RS01325Not AvailablePositive278032 - 27995471929.9

Displaying genes 1 – 10 of 6105 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.