Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingobiaceae
Genus
Sphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingobiaceae |
| Genus | Sphingobium |
| Species | Sphingobium sp. TKS |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Sphingobium sp. TKS plasmid pTK3, complete sequence.
Gene Summary
Adenine Count
16639 bp
Thymine Count
16942 bp
Guanine Count
27701 bp
Cytosine Count
26353 bp
Genome Length
87635 bp
Protein-coding Genes
94 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
11
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Attl | Not Available | Not Available | Positive | 265945 - 265958 | Not Available |
| site-specific integrase | K426_RS01290 | Not Available | Positive | 269110 - 270459 | 50487.4 |
| hypothetical protein | K426_RS01295 | Not Available | Positive | 270456 - 272243 | 64746.2 |
| integrase | K426_RS01300 | Not Available | Positive | 272240 - 274402 | 79640.3 |
| Putative ardc-like antirestriction protein | K426_RS01305 | Not Available | Positive | 274572 - 275438 | 31416.4 |
| hypothetical protein | K426_RS32815 | Not Available | Negative | 275523 - 275654 | 4651.56 |
| Putative ardc-like antirestriction protein | K426_RS30005 | Not Available | Positive | 275814 - 275993 | 6234.48 |
| Cysm | K426_RS01315 | Not Available | Negative | 276059 - 276985 | 31336.8 |
| hypothetical protein | K426_RS01320 | Not Available | Positive | 277150 - 277419 | 10008.9 |
| Reverse transcriptase | K426_RS01325 | Not Available | Positive | 278032 - 279954 | 71929.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.

