Segatella copri CAG:164

Gram-negativeRodAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Prevotellaceae

Genus

Segatella

Description

Segatella copri CAG:164 is a Gram-negative, rod-shaped bacterium classified as an anaerobe, indicating that it thrives in environments devoid of oxygen. This particular strain has only one replicon, suggesting a streamlined genomic organization which can be indicative of its ecological niche and metabolic capabilities. The strain is cataloged with the accession number CBCH000000000.1, which allows for its identification and differentiation from other microbial species. The anaerobic nature of Segatella copri CAG:164 points to its potential role in various ecosystems, particularly in the human gut where oxygen levels are low. Anaerobic bacteria are often involved in processes such as fermentation and the breakdown of complex carbohydrates, contributing to nutrient cycling and energy production within their environments. Understanding the metabolic pathways and ecological roles of S. copri may provide insights into its significance in gut microbiota dynamics and human health. Overall, the traits of Segatella copri CAG:164 highlight its specialized adaptations to anaerobic conditions, which may influence its interactions within microbial communities and its potential effects on host organisms.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyPrevotellaceae
GenusSegatella
SpeciesSegatella copri
StrainCAG:164

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Prevotella copri CAG:164 WGS project CBCH01000000 data, contig,

Gene Summary

Adenine Count

771523 bp

Thymine Count

763653 bp

Guanine Count

649429 bp

Cytosine Count

649177 bp

Genome Length

2833806 bp

Protein-coding Genes

2331 genes

Non-Coding Genes

54 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterized proteinBN510_00001Not AvailablePositive156 - 3989102.13
putative uncharacterized proteinBN510_00584Not AvailablePositive1679 - 235925279.0
atpaseBN510_00585Not AvailablePositive2578 - 379246759.5
nitroreductase family proteinBN510_00586Not AvailablePositive3814 - 420014641.8
putative uncharacterized proteinBN510_00587Not AvailableNegative4268 - 475618684.3
uncharacterized proteinBN510_00588Not AvailableNegative4743 - 605050016.5
putative dna mismatch repair protein mutsBN510_00589Not AvailablePositive6255 - 819873232.3
transcription elongation factor grea 2BN510_00590Not AvailableNegative8269 - 873317165.9
putative uncharacterized proteinBN510_00591Not AvailableNegative8890 - 1002042687.2
leucine responsive regulatory proteinBN510_00592Not AvailablePositive10244 - 1072018342.1

Displaying genes 1 – 10 of 2385 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

83 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0002780orotidine 5'-phosphateC10H10N2O11PNot available2149-82-8
Average365.168Da
Monoisotopic365.003866888Da
BASm0003987cob(I)alaminC62H88CoN13O14PChemical structure of cob(I)alamin18534-66-2
Average1329.3478Da
Monoisotopic1328.564331Da
BASm0014029(S)-3-Hydroxyisobutyric acidC19H35N5O6SeChemical structure of (S)-3-Hydroxyisobutyric acid26543-05-5
Average508.489Da
Monoisotopic509.175256Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014035Glycolic acidC2H4O3Chemical structure of Glycolic acid79-14-1
Average76.0514Da
Monoisotopic76.016043994Da
BASm0014036Glyoxylic acidC2H2O3Chemical structure of Glyoxylic acid298-12-4
Average74.0355Da
Monoisotopic74.00039393Da
BASm0014037Fumaric acidC4H4O4Chemical structure of Fumaric acid110-17-8
Average116.0722Da
Monoisotopic116.010958616Da

Displaying 1–10 of 83 metabolites

Health Effects

No health effects information available for this bacterium.