Salipiger abyssi str. JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi str. JLT2014 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic structure, which includes eight replicons. This multi-replicon feature suggests a complex genomic organization that may contribute to its adaptability and functionality in various environments. The organism is cataloged under several accessions, including NZ_CP015095.1, NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, and NZ_CP015097.1, indicating the availability of its genomic data for further study and analysis. These accessions provide insights into its genetic makeup, which could be instrumental in understanding its biological processes and ecological roles. The rod shape of Salipiger abyssi str. JLT2014 may offer advantages in motility and nutrient absorption, essential traits for survival in diverse aquatic environments. Its Gram-negative classification implies a specific outer membrane structure that can affect its interactions with other microorganisms and its resistance to certain antimicrobial agents. Overall, the unique traits of Salipiger abyssi str. JLT2014, particularly its multi-replicon genome and rod morphology, suggest its potential adaptability to various habitats, possibly contributing to its ecological niche in marine ecosystems. Understanding these characteristics may enhance our comprehension of microbial diversity and functionality in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
StrainJLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
formate dehydrogenase accessory sulfurtransferase fdhdGa0080574_RS15210Not AvailableNegative2409389 - 241021029032.9
formate dehydrogenase subunit alphaGa0080574_RS15215Not AvailableNegative2410214 - 2413135106233.0
formate dehydrogenase beta subunitGa0080574_RS15220Not AvailableNegative2413233 - 241475353330.2
formate dehydrogenase subunit gammaGa0080574_RS15225Not AvailableNegative2414750 - 241521716464.9
lysr family transcriptional regulatorGa0080574_RS15230Not AvailableNegative2415310 - 241620032157.1
monovalent cation/h+ antiporter subunit aGa0080574_RS15235Not AvailablePositive2416446 - 2419328103182.0
na+/h+ antiporter subunit cGa0080574_RS15240Not AvailablePositive2419330 - 241968312136.9
monovalent cation/h+ antiporter subunit dGa0080574_RS15245Not AvailablePositive2419680 - 242126055718.6
na+/h+ antiporter subunit eGa0080574_RS15250Not AvailablePositive2421264 - 242175517885.4
k+/h+ antiporter subunit fGa0080574_RS15255Not AvailablePositive2421752 - 24220219893.54

Displaying genes 2891 – 2900 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.