Salipiger abyssi str. JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi str. JLT2014 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic structure, which includes eight replicons. This multi-replicon feature suggests a complex genomic organization that may contribute to its adaptability and functionality in various environments. The organism is cataloged under several accessions, including NZ_CP015095.1, NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, and NZ_CP015097.1, indicating the availability of its genomic data for further study and analysis. These accessions provide insights into its genetic makeup, which could be instrumental in understanding its biological processes and ecological roles. The rod shape of Salipiger abyssi str. JLT2014 may offer advantages in motility and nutrient absorption, essential traits for survival in diverse aquatic environments. Its Gram-negative classification implies a specific outer membrane structure that can affect its interactions with other microorganisms and its resistance to certain antimicrobial agents. Overall, the unique traits of Salipiger abyssi str. JLT2014, particularly its multi-replicon genome and rod morphology, suggest its potential adaptability to various habitats, possibly contributing to its ecological niche in marine ecosystems. Understanding these characteristics may enhance our comprehension of microbial diversity and functionality in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
StrainJLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY6, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

45 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
sdr family nad(p)-dependent oxidoreductaseGa0080574_RS00680Not AvailableNegative1309 - 206426164.8
aminotransferase class ivGa0080574_RS00685Not AvailableNegative2061 - 299034062.8
histone deacetylase family proteinGa0080574_RS00690Not AvailableNegative3014 - 403937040.4
rida family proteinGa0080574_RS26135Not AvailablePositive4568 - 496314034.7
amidaseGa0080574_RS00700Not AvailablePositive4960 - 637849701.4
shikimate dehydrogenase family proteinGa0080574_RS00705Not AvailablePositive6382 - 718527375.2
thiamine pyrophosphate-dependent enzymeGa0080574_RS00710Not AvailablePositive7279 - 947178900.0
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferaseGa0080574_RS00715Not AvailablePositive9483 - 1072142904.5
hypothetical proteinGa0080574_RS25725Not AvailablePositive10764 - 110068636.44
isochorismatase family cysteine hydrolaseGa0080574_RS00720Not AvailableNegative11222 - 1190825168.0

Displaying genes 1 – 10 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.