Salipiger abyssi str. JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi str. JLT2014 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic structure, which includes eight replicons. This multi-replicon feature suggests a complex genomic organization that may contribute to its adaptability and functionality in various environments. The organism is cataloged under several accessions, including NZ_CP015095.1, NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, and NZ_CP015097.1, indicating the availability of its genomic data for further study and analysis. These accessions provide insights into its genetic makeup, which could be instrumental in understanding its biological processes and ecological roles. The rod shape of Salipiger abyssi str. JLT2014 may offer advantages in motility and nutrient absorption, essential traits for survival in diverse aquatic environments. Its Gram-negative classification implies a specific outer membrane structure that can affect its interactions with other microorganisms and its resistance to certain antimicrobial agents. Overall, the unique traits of Salipiger abyssi str. JLT2014, particularly its multi-replicon genome and rod morphology, suggest its potential adaptability to various habitats, possibly contributing to its ecological niche in marine ecosystems. Understanding these characteristics may enhance our comprehension of microbial diversity and functionality in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
StrainJLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
4-carboxymuconolactone decarboxylaseGa0080574_RS10815Not AvailablePositive1481875 - 148225813990.6
protocatechuate 3,4-dioxygenase subunit betaGa0080574_RS10820Not AvailablePositive1482255 - 148298327309.7
protocatechuate 3,4-dioxygenase subunit alphaGa0080574_RS10825Not AvailablePositive1482985 - 148359021828.5
3-carboxy-cis,cis-muconate cycloisomeraseGa0080574_RS10830Not AvailablePositive1483660 - 148471236950.6
choice-of-anchor i family proteinGa0080574_RS10835Not AvailableNegative1484841 - 1489454158382.0
duf2794 domain-containing proteinGa0080574_RS10840Not AvailablePositive1489723 - 149006412870.7
agmatinaseGa0080574_RS10845Not AvailableNegative1490080 - 149104834931.6
duf599 domain-containing proteinGa0080574_RS10850Not AvailableNegative1491126 - 149182725386.1
copd family proteinGa0080574_RS10855Not AvailableNegative1491832 - 149224215910.1
fad-linked oxidase c-terminal domain-containing proteinGa0080574_RS10860Not AvailablePositive1492366 - 149380850941.4

Displaying genes 2071 – 2080 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.