Salipiger abyssi str. JLT2014

rod

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Rhodobacterales

Family

Roseobacteraceae

Genus

Salipiger

Description

Salipiger abyssi str. JLT2014 is a Gram-negative, rod-shaped bacterium characterized by its unique genomic structure, which includes eight replicons. This multi-replicon feature suggests a complex genomic organization that may contribute to its adaptability and functionality in various environments. The organism is cataloged under several accessions, including NZ_CP015095.1, NZ_CP015090.1, NZ_CP015091.1, NZ_CP015092.1, NZ_CP015093.1, NZ_CP015094.1, NZ_CP015096.1, and NZ_CP015097.1, indicating the availability of its genomic data for further study and analysis. These accessions provide insights into its genetic makeup, which could be instrumental in understanding its biological processes and ecological roles. The rod shape of Salipiger abyssi str. JLT2014 may offer advantages in motility and nutrient absorption, essential traits for survival in diverse aquatic environments. Its Gram-negative classification implies a specific outer membrane structure that can affect its interactions with other microorganisms and its resistance to certain antimicrobial agents. Overall, the unique traits of Salipiger abyssi str. JLT2014, particularly its multi-replicon genome and rod morphology, suggest its potential adaptability to various habitats, possibly contributing to its ecological niche in marine ecosystems. Understanding these characteristics may enhance our comprehension of microbial diversity and functionality in oceanic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderRhodobacterales
FamilyRoseobacteraceae
GenusSalipiger
SpeciesSalipiger abyssi
StrainJLT2014

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Salipiger abyssi strain JLT2014 plasmid pPABY2, complete sequence.

Gene Summary

Adenine Count

Not Available

Thymine Count

Not Available

Guanine Count

Not Available

Cytosine Count

Not Available

Genome Length

Not Available

Protein-coding Genes

179 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

8

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
precorrin-4 c(11)-methyltransferaseGa0080574_RS07480Not AvailablePositive805125 - 80593428265.7
cobyrinate a,c-diamide synthaseGa0080574_RS07485Not AvailablePositive805927 - 80724345992.1
uroporphyrinogen-iii c-methyltransferaseGa0080574_RS07490Not AvailablePositive807240 - 80797425508.8
precorrin-6a synthase (deacetylating)Ga0080574_RS07495Not AvailablePositive807967 - 80869826475.0
energy-coupling factor abc transporter atp-binding proteinGa0080574_RS07500Not AvailableNegative808954 - 80961023700.9
cobalt ecf transporter t component cbiqGa0080574_RS07505Not AvailableNegative809601 - 81038928984.6
cobalt abc transporter permeaseGa0080574_RS07510Not AvailableNegative810393 - 81098019944.9
cobalt transporter cbimGa0080574_RS07515Not AvailableNegative810977 - 81159420523.9
duf4198 domain-containing proteinGa0080574_RS07520Not AvailableNegative811600 - 81238528366.5
sh3 domain-containing proteinGa0080574_RS07525Not AvailableNegative812864 - 81316610851.1

Displaying genes 1411 – 1420 of 5022 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.