Flavobacterium aquaticum str. CGMCC 1.12398

rod

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Flavobacteriaceae

Genus

Flavobacterium

Description

Flavobacterium aquaticum str. CGMCC 1.12398 is a Gram-negative bacterium characterized by its rod shape and non-motile nature. This species is notable for possessing flagella, which is a common trait among many bacterial taxa, despite its non-motility indicating that it may not utilize these structures for movement. The strain has a single replicon, suggesting a streamlined genetic organization that is typical for its genus. The genomic information for Flavobacterium aquaticum str. CGMCC 1.12398 is cataloged under the accession number QLMI00000000.1, providing a resource for researchers interested in the genetic and functional characteristics of this organism. From a biological and ecological perspective, members of the Flavobacterium genus are often found in aquatic environments, where they play significant roles in the degradation of organic matter. This specific strain may contribute to nutrient cycling and the maintenance of ecological balance in freshwater ecosystems. Understanding the traits and functions of Flavobacterium aquaticum str. CGMCC 1.12398 can provide insights into the ecological roles of bacteria in aquatic habitats and their potential applications in bioremediation or environmental monitoring.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyFlavobacteriaceae
GenusFlavobacterium
SpeciesFlavobacterium aquaticum
StrainCGMCC 1.12398

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceYes
Number of membranesNot Available
Image of Flavobacterium aquaticum str. CGMCC 1.12398
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Flavobacterium aquaticum str. CGMCC 1.12398


Gene Summary

Adenine Count

953442 bp

Thymine Count

951647 bp

Guanine Count

457117 bp

Cytosine Count

459095 bp

Genome Length

2821499 bp

Protein-coding Genes

2566 genes

Non-Coding Genes

78 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
1_nc_021800: prophage clp protease-like proteinB0I03_10534Not AvailablePositive1843733 - 184504047731.7
hypothetical proteinB0I03_10535Not AvailablePositive1845075 - 184599533535.2
1_nc_021800: hypothetical proteinB0I03_10536Not AvailablePositive1846084 - 184665620436.8
hypothetical proteinB0I03_10537Not AvailablePositive1846747 - 184715415645.4
1_nc_021800: phage portal proteinB0I03_10538Not AvailablePositive1847154 - 184829042967.3
1_nc_021800: structural proteinB0I03_10539Not AvailablePositive1848283 - 184880119727.6
Hypothetical proteinB0I03_10540Not AvailablePositive1848805 - 185086273947.4
Putative tail fiber proteinB0I03_10541Not AvailablePositive1850862 - 185271567616.3
hypothetical proteinB0I03_10542Not AvailablePositive1852718 - 18529067522.55
Hypothetical proteinB0I03_10543Not AvailablePositive1852969 - 185343017813.2

Displaying genes 1 – 10 of 155 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

13 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm0003187N-succinyl-(2S,6S)-2,6-diaminoheptanedioateC11H16N2O7Chemical structure of N-succinyl-(2S,6S)-2,6-diaminoheptanedioateNot available
Average288.257Da
Monoisotopic288.096848Da
BASm00033514-methyl-5-(2-phosphooxyethyl)-thiazoleC6H8NO4PSChemical structure of 4-methyl-5-(2-phosphooxyethyl)-thiazoleNot available
Average221.17Da
Monoisotopic220.9922631Da
BASm0003389NADP(+)C21H25N7O17P3Chemical structure of NADP(+)Not available
Average740.386Da
Monoisotopic740.053624107Da
BASm0003462(2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinateC13H19N4O12PChemical structure of (2S)-2-[5-amino-1-(5-phospho-beta-D-ribosyl)imidazole-4-carboxamido]succinate3031-95-6
Average454.2833Da
Monoisotopic454.0737086Da
BASm00034972-C-methyl-D-erythritol 2,4-cyclic diphosphateC5H10O9P2Chemical structure of 2-C-methyl-D-erythritol 2,4-cyclic diphosphate143488-44-2
Average276.075Da
Monoisotopic275.9800049Da
BASm0003657N-acetyl-D-muramate 6-phosphateC11H17NO11PChemical structure of N-acetyl-D-muramate 6-phosphateNot available
Average370.228Da
Monoisotopic370.0555681Da
BASm0008099(2E)-4-hydroxy-3-methylbut-2-enyl diphosphateC5H9O8P2Chemical structure of (2E)-4-hydroxy-3-methylbut-2-enyl diphosphateNot available
Average259.0677Da
Monoisotopic258.9772653Da
BASm0010316N(1)-(5-phospho-beta-D-ribosyl)glycinamideC7H14N2O8PChemical structure of N(1)-(5-phospho-beta-D-ribosyl)glycinamideNot available
Average285.169Da
Monoisotopic285.049326Da

Displaying 1–10 of 13 metabolites

Health Effects

No health effects information available for this bacterium.