Afipia carboxidovorans OM5

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Afipia

Description

Afipia carboxidovorans OM5 is a Gram-negative, rod-shaped bacterium characterized by its ability to metabolize carbon monoxide as a chemolithoautotrophic energy source. This microbe thrives in diverse habitats, which suggests a remarkable adaptability to various environmental conditions. As an aerobe, A. carboxidovorans OM5 requires oxygen for growth, indicating its reliance on aerobic metabolic pathways to sustain its energy demands. The chemolithoautotrophic nature of A. carboxidovorans OM5 positions it uniquely within microbial communities, as it can utilize inorganic compounds for energy while fixing carbon dioxide for biomass production. This metabolic strategy not only allows it to occupy ecological niches where organic carbon may be limited but also contributes to the cycling of carbon and other nutrients, potentially influencing local ecosystem dynamics. Furthermore, the presence of A. carboxidovorans OM5 in multiple habitats raises intriguing questions about its ecological roles and interactions with other microbial species. Its capacity to utilize carbon monoxide may also suggest a potential involvement in biogeochemical cycles, particularly in environments where this gas is prevalent, such as in the aftermath of combustion processes. Understanding the specific contributions of A. carboxidovorans OM5 to its ecosystems could provide insights into microbial responses to environmental changes and the overall functionality of microbial communities.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusAfipia
SpeciesAfipia carboxidovorans
StrainOM5

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Afipia carboxidovorans OM5
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceChemolithoautotroph
PathogenicityNot Available

Genome Summary

Afipia carboxidovorans OM5 plasmid pOC167, complete sequence.

Gene Summary

Adenine Count

32940 bp

Thymine Count

32945 bp

Guanine Count

51526 bp

Cytosine Count

49858 bp

Genome Length

167269 bp

Protein-coding Genes

159 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
divalent metal ion exporter subunit ihpaOCA5_RS18100Not AvailablePositive78351 - 7962245315.3
divalent metal ion exporter adaptor subunit ihpbOCA5_RS18105Not AvailablePositive79619 - 8059634882.8
efflux rnd transporter permease subunitOCA5_RS18110Not AvailablePositive80689 - 83904115100.0
hypothetical proteinOCA5_RS18115Not AvailablePositive83901 - 8427512889.6
opgc family proteinOCA5_RS18120Not AvailablePositive84325 - 8544642003.1
heavy metal translocating p-type atpaseOCA5_RS18125Not AvailablePositive85595 - 8811788856.2
methyltransferase family proteinOCA5_RS18130Not AvailablePositive88481 - 8903220368.6
sugar transporterOCA5_RS18135Not AvailableNegative89118 - 9003433429.0
cytochrome c/ftr1 family iron permeaseOCA5_RS18140Not AvailableNegative90031 - 9204972284.5
flagellar hook-basal body complex proteinOCA5_RS18145Not AvailablePositive92502 - 9323325769.5

Displaying genes 81 – 90 of 7526 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.