Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Afipia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Afipia |
| Species | Afipia carboxidovorans |
| Strain | OM5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Chemolithoautotroph |
| Pathogenicity | Not Available |
Genome Summary
Afipia carboxidovorans OM5, Complete Genome
Gene Summary
Adenine Count
706163 bp
Thymine Count
702213 bp
Guanine Count
1168254 bp
Cytosine Count
1168999 bp
Genome Length
3745629 bp
Protein-coding Genes
3653 genes
Non-Coding Genes
124 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| plasmid partitioning protein repa | OCA5_RS17705 | Not Available | Positive | 101 - 1324 | 45066.8 |
| plasmid partitioning protein repb | OCA5_RS17710 | Not Available | Positive | 1321 - 2304 | 36189.4 |
| plasmid replication protein repc | OCA5_RS17715 | Not Available | Positive | 2498 - 3730 | 44890.9 |
| single-stranded dna-binding protein | OCA5_RS17720 | Not Available | Positive | 4349 - 4681 | 12435.8 |
| helix-turn-helix domain-containing protein | OCA5_RS17725 | Not Available | Negative | 4742 - 5158 | 15426.5 |
| helix-turn-helix domain-containing protein | OCA5_RS17730 | Not Available | Negative | 5223 - 5534 | 11486.6 |
| plasmid replication protein repc | OCA5_RS17735 | Not Available | Positive | 5848 - 7080 | 44587.0 |
| hypothetical protein | OCA5_RS19560 | Not Available | Negative | 7172 - 7588 | 15463.3 |
| para family protein | OCA5_RS17740 | Not Available | Negative | 7585 - 8286 | 25555.3 |
| hypothetical protein | OCA5_RS17745 | Not Available | Positive | 8735 - 9307 | 20361.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
