Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

Non-motileAerobic

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Streptosporangiales

Family

Nocardiopsidaceae

Genus

Nocardiopsis

Description

This soil bacterium has been known by a number of other names since its isolation (among them Nocardiopsis antarctica and Streptomyces flavidofuscus). Cells grow aerobically as hyphae and form elongated, smooth irregularly sized spores. N.dassonvillei has been isolated from a wide variety of habitats, including soil, glaciers, mildewed fodder, salterns and patients with conjunctivitis or cholangitis. This strain is the type strain, isolated in 1904, but it is not clear what its geographical and ecological origins are. It is an occasional human pathogen, causing actinomycetoma, which are bacteria-filled abcesses (adapted from http://standardsingenomics.org/index.php/sigen/article/view/sigs.1373474). (EBI Integr8)

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderStreptosporangiales
FamilyNocardiopsidaceae
GenusNocardiopsis
SpeciesNocardiopsis dassonvillei
StrainDSM 43111

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNo
Flagellar presenceYes
Number of membranes1
Ecology, Host, and Life Cycle
Oxygen requirementsAerobic
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111

Accession NumberNC_014210.1

Gene Summary

Adenine Count

782352 bp

Thymine Count

784846 bp

Guanine Count

2105941 bp

Cytosine Count

2094819 bp

Genome Length

5767958 bp

Protein-coding Genes

4829 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
had family hydrolaseNDAS_RS24045Not Available-101 - 81125112.9
isopentenyl-diphosphate delta-isomeraseNDAS_RS24050Not Available-1036 - 159320453.0
sdr family nad(p)-dependent oxidoreductaseNDAS_RS24055Not Available+1876 - 336353836.1
response regulator transcription factorNDAS_RS24060Not Available-3615 - 431324303.3
sensor histidine kinaseNDAS_RS24065Not Available-4319 - 557543248.2
duf418 domain-containing proteinNDAS_RS24070Not Available+5727 - 709747470.5
ubiquitin-like small modifier protein 1NDAS_RS24075Not Available-7342 - 76269917.79
sialidase family proteinNDAS_RS24080Not Available-7628 - 873139069.2
tetr/acrr family transcriptional regulatorNDAS_RS24085Not Available+9178 - 978321962.4
nuclear transport factor 2 family proteinNDAS_RS24090Not Available-9954 - 1034613908.0

Displaying genes 1 – 10 of 5606 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites