Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Streptosporangiales
Family
Nocardiopsidaceae
Genus
Nocardiopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Streptosporangiales |
| Family | Nocardiopsidaceae |
| Genus | Nocardiopsis |
| Species | Nocardiopsis sp. TSRI0078 |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Nocardiopsis sp. TSRI0078
Accession NumberLWLB00000000.1
Gene Summary
Adenine Count
860608 bp
Thymine Count
857659 bp
Guanine Count
2192724 bp
Cytosine Count
2196921 bp
Genome Length
6108783 bp
Protein-coding Genes
5021 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| atp-dependent dna helicase pcra | A6A08_00005 | Not Available | - | 227 - 2596 | 86623.2 |
| nucleoside hydrolase | A6A08_00010 | Not Available | + | 2775 - 3704 | 32755.2 |
| dna-binding response regulator | A6A08_00015 | Not Available | - | 3858 - 4529 | 24131.9 |
| histidine kinase | A6A08_00020 | Not Available | - | 4698 - 5903 | 43698.0 |
| hypothetical protein | A6A08_00025 | Not Available | + | 6128 - 7531 | 47908.1 |
| hypothetical protein | A6A08_00030 | Not Available | + | 7518 - 7742 | 7976.7 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase | A6A08_00035 | Not Available | - | 7841 - 8728 | 31087.6 |
| carnitine dehydratase | A6A08_00040 | Not Available | + | 8899 - 9993 | 38849.2 |
| hypothetical protein | A6A08_00045 | Not Available | + | 10104 - 12506 | 82789.9 |
| anti-anti-sigma factor | A6A08_00050 | Not Available | + | 13077 - 13430 | 12778.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.