Citrobacter koseri ATCC BAA-895

Gram-negativeRodMotileFacultatively anaerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Enterobacterales

Family

Enterobacteriaceae

Genus

Citrobacter

Description

Citrobacter koseri ATCC BAA-895 is a gram-negative, rod-shaped bacterium that thrives at mesophilic temperatures, prefers to utilize organic compounds as a carbon source, and is classified as a facultative anaerobe. This species belongs to the Enterobacteriaceae family and is commonly found in the human gut, as well as in various environmental sources such as soil and water.The gram-negative characteristic of C. koseri signifies a thinner peptidoglycan layer and an outer membrane containing lipopolysaccharides, which contributes to its virulence. Its rod shape is typical of many Enterobacteriaceae, providing mobility and surface area for nutrient absorption. As a mesophilic organism, C. koseri flourishes between 30°C and 37°C, making it well-suited for growth within human body temperatures. The facultative anaerobic nature of this microbe allows it to adapt to both aerobic and anaerobic environments, giving it the flexibility to survive in various ecological niches. C. koseri is predominantly found in the intestinal tracts of humans and animals, where it plays a role in the gut microbiome. It can also be isolated from clinical specimens, particularly in immunocompromised patients, where it is associated with opportunistic infections. Pathogenic strains have been implicated in neonatal meningitis and other serious infections, emphasizing the importance of understanding this bacterium in clinical settings. Additionally, C. koseri exhibits biochemical versatility, which allows it to metabolize a wide range of substrates. This metabolic adaptability, coupled with its potential pathogenicity, makes it a significant subject of research within microbiology and infectious disease studies. Its ability to form biofilms may also contribute to its persistence in hospital environments, where it can pose a risk to vulnerable populations.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderEnterobacterales
FamilyEnterobacteriaceae
GenusCitrobacter
SpeciesCitrobacter koseri
StrainATCC BAA-895

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Citrobacter koseri ATCC BAA-895
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsFacultatively anaerobe
Optimal temperatureNot Available
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityYes

Genome Summary

Citrobacter koseri ATCC BAA-895 plasmid pCKO3, complete sequence.

Gene Summary

Adenine Count

2074 bp

Thymine Count

2092 bp

Guanine Count

2264 bp

Cytosine Count

2864 bp

Genome Length

9294 bp

Protein-coding Genes

10 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
Hypothetical proteinCKO_RS23720Not AvailableNegative1761647 - 17618476446.37
Putative major tail proteinCKO_RS07890Not AvailableNegative1761905 - 176280731783.7
Putative tail terminator proteinCKO_RS07895Not AvailableNegative1762834 - 176322613974.7
Hypothetical proteinCKO_RS07900Not AvailableNegative1763223 - 176377420037.6
Hypothetical proteinCKO_RS07910Not AvailableNegative1763973 - 176435613844.2
Putative head-tail joining proteinCKO_RS07915Not AvailableNegative1764596 - 176500614390.2
Hypothetical proteinCKO_RS23460Not AvailableNegative1765010 - 176530311057.3
Putative coat proteinCKO_RS07925Not AvailableNegative1765351 - 176649039340.7
Hypothetical proteinCKO_RS07930Not AvailableNegative1766574 - 176733827464.3
Head morphogenesis proteinCKO_RS07935Not AvailableNegative1767600 - 176871241205.9

Displaying genes 31 – 40 of 4419 in total

Metabolites

1842 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002532-oxopent-4-enoateC5H5O3Chemical structure of 2-oxopent-4-enoateNot available
Average113.093Da
Monoisotopic113.024417601Da
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da
BASm0000553biphenyl-2,3-diolC12H10O2Chemical structure of biphenyl-2,3-diolNot available
Average186.2066Da
Monoisotopic186.0680796Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000893crotonobetaineC7H13NO2Chemical structure of crotonobetaine927-89-9
Average143.1836Da
Monoisotopic143.0946287Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da

Displaying 1–10 of 1842 metabolites

Health Effects

No health effects information available for this bacterium.