Chlamydia caviae GPIC

Gram-negativeRodNon-motile

Kingdom

Pseudomonadati

Phylum

Chlamydiota

Class

Chlamydiia

Order

Chlamydiales

Family

Chlamydiaceae

Genus

Chlamydia

Description

Chlamydia caviae GPIC is a Gram-negative, rod-shaped bacterium that associates closely with host organisms. This microbe thrives optimally at a temperature of 37.0°C, indicative of its adaptation to warm-blooded hosts. As a member of the Chlamydia genus, it is characterized by its obligate intracellular lifestyle, relying on host cells for replication and survival. While specific pathogenicity details for C. caviae GPIC are not available, its classification within the Chlamydiaceae family suggests potential involvement in host-associated infections, as many chlamydial species are known to exhibit similar traits. The host-associated habitat emphasizes its dependency on the cellular environment provided by living organisms, which may influence its developmental cycle and transmission dynamics. The ecological role of Chlamydia caviae GPIC could extend beyond mere pathogenicity, as it might also play a part in microbial communities within host organisms, potentially influencing host health and microbiome composition. This relationship underscores the importance of understanding host-associated microbes in broader ecological contexts, particularly with regard to their interactions within the host's microbiome and their potential impact on host physiology.

Taxonomy

KingdomPseudomonadati
PhylumChlamydiota
ClassChlamydiia
OrderChlamydiales
FamilyChlamydiaceae
GenusChlamydia
SpeciesChlamydia caviae
StrainGPIC

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityNo
Flagellar presenceYes
Number of membranes2
Image of Chlamydia caviae GPIC
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipSymbiotic
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Chlamydia caviae GPIC, complete sequence.

Gene Summary

Adenine Count

357265 bp

Thymine Count

355887 bp

Guanine Count

229757 bp

Cytosine Count

230481 bp

Genome Length

1173390 bp

Protein-coding Genes

986 genes

Non-Coding Genes

44 genes

# of Chromosomes/Plasmids

2

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
para family proteinCCA_RS05385Not AvailablePositive7 - 67825165.2
ct583 family proteinCCA_RS05115Not AvailablePositive675 - 141528046.8
tyrosine-type recombinase/integraseCCA_RS05120Not AvailablePositive1638 - 256135335.0
site-specific integraseCCA_RS05125Not AvailableNegative2622 - 361136997.2
replicative dna helicaseCCA_RS05130Not AvailablePositive3733 - 510953051.2
hypothetical proteinCCA_RS05135Not AvailablePositive5103 - 614640374.6
virulence factor pgp3CCA_RS05140Not AvailablePositive6201 - 699527798.0
hypothetical proteinCCA_RS05145Not AvailablePositive7093 - 740111886.8
porphobilinogen synthaseCCA_RS00005Not AvailablePositive57 - 105236819.7
na(+)-translocating nadh-quinone reductase subunit aCCA_RS00010Not AvailableNegative1068 - 248052422.8

Displaying genes 1 – 10 of 1038 in total

Metabolites

374 records
Metabolite IDMetabolite nameStructureCAS number
BASm00002603alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateC24H37O5Chemical structure of 3alpha,7alpha-dihydroxy-12-oxo-5beta-cholanateNot available
Average405.556Da
Monoisotopic405.264647871Da
BASm0000592(S)-1-phenylethanolC8H10OChemical structure of (S)-1-phenylethanolNot available
Average122.1644Da
Monoisotopic122.0731649Da
BASm0000989GlycerolC3H8O3Chemical structure of Glycerol56-81-5
Average92.0938Da
Monoisotopic92.04734412Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001462ubiquinone-0C9H10O4Chemical structure of ubiquinone-0605-94-7
Average182.1733Da
Monoisotopic182.057908808Da
BASm0002198beta-D-ribofuranoseC5H10O5Chemical structure of beta-D-ribofuranose50-69-1
Average150.1299Da
Monoisotopic150.05282343Da
BASm0002593(2E)-dodecenoyl-CoAC33H52N7O17P3SChemical structure of (2E)-dodecenoyl-CoA1066-12-2
Average943.789Da
Monoisotopic943.2353235Da
BASm0002626(6Z,9Z,12Z)-octadecatrienoyl-CoAC39H60N7O17P3SChemical structure of (6Z,9Z,12Z)-octadecatrienoyl-CoANot available
Average1023.92Da
Monoisotopic1023.300119988Da
BASm0002963meso-2,6-diaminoheptanedioateC7H14N2O4Chemical structure of meso-2,6-diaminoheptanedioate922-54-3
Average190.1971Da
Monoisotopic190.0953569Da
BASm00029834-CDP-2-C-methyl-D-erythritolC14H23N3O14P2Chemical structure of 4-CDP-2-C-methyl-D-erythritolNot available
Average519.294Da
Monoisotopic519.0666236Da

Displaying 1–10 of 374 metabolites

Health Effects

No health effects information available for this bacterium.