Alistipes finegoldii

Gram-negativeAnaerobe

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Bacteroidia

Order

Bacteroidales

Family

Rikenellaceae

Genus

Alistipes

Description

Alistipes finegoldii is a Gram-negative, rod-shaped microbe that thrives in mesophilic temperatures, classified as a Chemoheterotroph, and can be found in various body sites, including the gut, skin, and mucous membranes, across different species. As an Obligate Anaerobe, Alistipes finegoldii requires the absence of oxygen to survive and grow. The Gram-negative characteristic indicates that the microbe's cell wall contains a thin peptidoglycan layer, making it more susceptible to certain antibiotics. Its rod-shaped morphology allows it to inhabit and interact with its environment in a specific way, potentially contributing to its ability to colonize and persist in different body sites. As a Chemoheterotroph, Alistipes finegoldii relies on organic compounds for energy and carbon, breaking down complex molecules to sustain its growth and survival. This metabolic characteristic is crucial for its role in the gut microbiome, where it contributes to the degradation of undigested carbohydrates and production of short-chain fatty acids. The mesophilic temperature preference of Alistipes finegoldii allows it to thrive in temperatures ranging from 20°C to 45°C, which is typical of the human body's core temperature. Its ability to inhabit various body sites, including the gut, skin, and mucous membranes, highlights its adaptability and potential to interact with different host environments. Alistipes finegoldii has been implicated in the production of certain metabolites that may influence host immune responses and overall health. Research has shown that this microbe can produce anti-inflammatory compounds, which may contribute to its potential therapeutic applications in treating certain diseases. Furthermore, Alistipes finegoldii has been detected in higher abundance in individuals with certain metabolic disorders, suggesting a potential link between this microbe and host metabolism.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassBacteroidia
OrderBacteroidales
FamilyRikenellaceae
GenusAlistipes
SpeciesAlistipes finegoldii
StrainNo strain

Profile

Physiology
Gram staining propertiesNegative
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Oncorhynchus mykiss
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Alistipes finegoldii strain 2789STDY5608890 genome assembly,

Gene Summary

Adenine Count

702205 bp

Thymine Count

710038 bp

Guanine Count

972140 bp

Cytosine Count

963508 bp

Genome Length

3372095 bp

Protein-coding Genes

2773 genes

Non-Coding Genes

47 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
uncharacterised proteinERS852447_02364Not AvailableNegative2814472 - 281715396343.8
colicin i receptor precursorERS852447_02365Not AvailableNegative2817168 - 281987999631.8
putative inner membrane proteinERS852447_02366Not AvailablePositive2820369 - 282142139254.7
methylmalonyl-coa carboxyltransferase 5s subunitERS852447_02367Not AvailablePositive2821587 - 282344067521.0
Trna-metNot AvailableNot AvailablePositive2824978 - 2825054Not Available
exopolysaccharide biosynthesis protein related to n-acetylglucosamine-1-phosphodiester alpha-n-acetylglucosaminidaseERS852447_02369Not AvailablePositive2825548 - 282700251499.1
phosphoribosyl-atp pyrophosphataseERS852447_02370Not AvailableNegative2827136 - 282775622624.0
imidazole glycerol phosphate synthase subunit hisfERS852447_02371Not AvailableNegative2827762 - 282851426806.2
1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)m ethylideneamino] imidazole-4-carboxamide isomeraseERS852447_02372Not AvailableNegative2828496 - 282922725899.2
imidazole glycerol phosphate synthase subunit hishERS852447_02373Not AvailableNegative2829232 - 282981921114.4

Displaying genes 2351 – 2360 of 2820 in total

Metabolites

99 records
Metabolite IDMetabolite nameStructureCAS number
BASm0001865diphosphateHO7P2Chemical structure of diphosphateNot available
Average174.95Da
Monoisotopic174.9213971Da
BASm00055001-octadecanoyl-sn-glycero-3-phosphateC21H41O7PChemical structure of 1-octadecanoyl-sn-glycero-3-phosphateNot available
Average436.5198Da
Monoisotopic436.2589902Da
BASm0012554N-acetyl-beta-D-glucosaminyl-(1->4)-1,6-anhydro-N-acetyl-beta-D-muramoyl-L-alanyl-gamma-D-glutamyl-meso-diaminoheptanedioate-D-alanineC37H57N7O20Not availableNot available
Average919.893Da
Monoisotopic919.366934423Da
BASm0014031Butyric acidC4H8O2Chemical structure of Butyric acid107-92-6
Average88.1051Da
Monoisotopic88.0524295Da
BASm0014032Acetic acidC2H4O2Chemical structure of Acetic acid64-19-7
Average60.052Da
Monoisotopic60.021129372Da
BASm0014033AmmoniaH3NChemical structure of Ammonia7664-41-7
Average17.0305Da
Monoisotopic17.026549101Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014041Oleic acidC18H34O2Chemical structure of Oleic acid112-80-1
Average282.4614Da
Monoisotopic282.255880332Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0014057Isovaleric acidC5H10O2Chemical structure of Isovaleric acid503-74-2
Average102.1317Da
Monoisotopic102.068079564Da

Displaying 1–10 of 99 metabolites

Health Effects

No health effects information available for this bacterium.