Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium psychrophilum |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 15 |
| Temperature range | Psychrophilic |
| Habitat | Multiple |
| Biotic relationship | Not Available |
| Host(s) | Oncorhynchus mykiss, Salmonidae |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Chemoheterotroph |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1867458 bp
Thymine Count
1848403 bp
Guanine Count
1276374 bp
Cytosine Count
1278284 bp
Genome Length
6270519 bp
Protein-coding Genes
6212 genes
Non-Coding Genes
65 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| molecular chaperone dnak | DI539_00045 | Not Available | Positive | 8664 - 9044 | 14471.4 |
| Ncrna_class:other | Not Available | Not Available | Positive | 9442 - 9547 | Not Available |
| hypothetical protein | DI539_00050 | Not Available | Positive | 9653 - 10216 | 21826.1 |
| hypothetical protein | DI539_00055 | Not Available | Positive | 10261 - 10878 | 23937.1 |
| Ncrna_class:srp_rna | Not Available | Not Available | Positive | 11164 - 11262 | Not Available |
| response regulator | DI539_00060 | Not Available | Negative | 10918 - 11361 | 16916.3 |
| lipoprotein signal peptidase | DI539_00065 | Not Available | Positive | 11741 - 12334 | 22196.4 |
| 5-formyltetrahydrofolate cyclo-ligase | DI539_00070 | Not Available | Negative | 12408 - 12977 | 21836.1 |
| dna methylase | DI539_00075 | Not Available | Negative | 13110 - 13532 | 16309.9 |
| hypothetical protein | DI539_00080 | Not Available | Positive | 13777 - 14100 | 12122.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Bacterial cold water disease | Causes | PMC12152302 |
| Rainbow trout fry syndrome | Causes | PMC12152302 |
