Clostridium perfringens

Gram-positiveRodMotileAnaerobe

Kingdom

Bacillati

Phylum

Bacillota

Class

Clostridia

Order

Eubacteriales

Family

Clostridiaceae

Genus

Clostridium

Description

Clostridium perfringens is a gram-positive, rod-shaped microbe that thrives in a temperature range of 25-40°C, classifying it as thermostable. As a heterotroph, it obtains its energy from the breakdown of organic compounds, specifically glucose, through fermentation, producing lactic acid as its primary metabolic byproduct. This microbe is capable of producing energy through anaerobic respiration, utilizing the fermentation products to drive its metabolic activities. The gram-positive nature of Clostridium perfringens refers to the presence of a thick peptidoglycan layer in its cell wall, which is characteristic of this type of bacterium. In terms of shape, Clostridium perfringens is a rod-shaped bacterium, with a length of approximately 3-5 micrometers. It is widely distributed across all body sites, including the gastrointestinal tract, skin, and wounds, where it can establish itself in the absence of oxygen. As an obligate anaerobe, Clostridium perfringens requires an anoxic environment to grow, meaning it cannot tolerate the presence of oxygen. The cell wall of this microbe also contains a unique toxic compound, alpha-toxin, which is responsible for its pathogenic properties. Despite its toxic nature, Clostridium perfringens is a ubiquitous microbe that is naturally present in the gut of many animals, including humans. In fact, it is estimated that up to 80% of adults harbor Clostridium perfringens in their gastrointestinal tract, often without displaying any symptoms. However, in individuals with compromised immune systems or those who are malnourished, Clostridium perfringens can cause a range of diseases, including enteritis, abscesses, and toxic shock syndrome.

Taxonomy

KingdomBacillati
PhylumBacillota
ClassClostridia
OrderEubacteriales
FamilyClostridiaceae
GenusClostridium
SpeciesClostridium perfringens
StrainNo strain

Profile

Physiology
Gram staining propertiesPositive
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes1
Image of Clostridium perfringens
AI-generated image based on bacteria physiology
Ecology, Host, and Life Cycle
Oxygen requirementsAnaerobe
Optimal temperature37
Temperature rangeMesophilic
HabitatHostAssociated
Biotic relationshipFree living
Host(s)Homo sapiens, Gallus gallus, Bos
Cell arrangementPairs - Singles - Chains
SporulationNot Available
Energy sourceChemoorganotroph
PathogenicityAnimal; Human

Genome Summary

Clostridium perfringens strain EHE-NE18 plasmid pJIR3844, complete

Gene Summary

Adenine Count

23281 bp

Thymine Count

28542 bp

Guanine Count

7181 bp

Cytosine Count

10602 bp

Genome Length

69606 bp

Protein-coding Genes

73 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
tcpjCYK96_RS17405Not AvailableNegative1402 - 15214385.02
reverse transcriptase/maturase family proteinCYK96_RS16305Not AvailableNegative1628 - 343071341.0
glucosaminidase domain-containing proteinCYK96_RS16310Not AvailableNegative3985 - 488132819.2
atp-binding proteinCYK96_RS16315Not AvailableNegative4881 - 740696223.3
tcpe family conjugal transfer membrane proteinCYK96_RS16320Not AvailableNegative7464 - 783214450.1
conjugal transfer membrane protein tcpdCYK96_RS16325Not AvailableNegative7844 - 819112752.3
conjugal transfer proteinCYK96_RS16330Not AvailableNegative8203 - 928241495.0
ftsk/spoiiie domain-containing proteinCYK96_RS16335Not AvailableNegative9275 - 1025837643.5
ftsk/spoiiie domain-containing proteinCYK96_RS16340Not AvailableNegative10273 - 1185660237.6
mobm family relaxase tcpmCYK96_RS16345Not AvailableNegative11919 - 1271931274.7

Displaying genes 1 – 10 of 3639 in total

Metabolites

12 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000719chloramphenicol 3-acetateC13H14Cl2N2O6Chemical structure of chloramphenicol 3-acetateNot available
Average365.16Da
Monoisotopic364.0228916Da
BASm0014039L-Lactic acidC3H6O3Chemical structure of L-Lactic acid79-33-4
Average90.0779Da
Monoisotopic90.031694058Da
BASm0014045Propionic acidC3H6O2Chemical structure of Propionic acid79-09-4
Average74.0785Da
Monoisotopic74.036779436Da
BASm0034653Starch, Structure 1 (1,6-{7[1,4-Glc], 4[1,4-Glc]})C66H112O56Chemical structure of Starch, Structure 1 (1,6-{7[1,4-Glc], 4[1,4-Glc]})NULL
Average1801.566Da
Monoisotopic1800.591622326Da
BASm0039643Enterococcus faecalisNot available85-87-0Not available
BASm0039647Bacteroides thetaiotaomicronNot available921-01-7Not available
BASm0039655Achromobacter xylosoxidans A8Not availableNot availableNot available
BASm0039676Clostridium nexileNot availableNot availableNot available
BASm0039735Streptococcus anginosusNot availableNot availableNot available
BASm0039886Acinetobacter calcoaceticus subsp. anitratusNot availableNot availableNot available

Displaying 1–10 of 12 metabolites

Health Effects

Health ConditionRelationReference
Food poisoningCausesPMC5932972
EnterotoxaemiaCausesPMC5932972
Gangrenous dermatitisCausesPMC5932972
Necrotic enteritisCausesPMC5932972
Acute necrotic enteritisCausesPMC13236465
DiarrheaCausesPMC13236465
Liver abscessCausesPMC4394104
Necrotic enteritisCausesPMC5457660
Mild diarrheaCausesPMC5457660
Clostridial myonecrosisCausesPMC5457660

Displaying health effects 1 – 10 of 58 in total