Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | BKM63_00005 | Not Available | Negative | 1 - 2669 | 99042.2 |
| glucosamine-6-phosphate deaminase | BKM63_00010 | Not Available | Negative | 2970 - 4895 | 72752.3 |
| deor family transcriptional regulator | BKM63_00015 | Not Available | Negative | 5036 - 5785 | 27637.9 |
| susc/raga family tonb-linked outer membrane protein | BKM63_00020 | Not Available | Positive | 6030 - 9317 | 120243.0 |
| ragb/susd family nutrient uptake outer membrane protein | BKM63_00025 | Not Available | Positive | 9342 - 11075 | 64749.2 |
| hypothetical protein | BKM63_00030 | Not Available | Positive | 11337 - 12536 | 44835.3 |
| n-acetylmuramic acid 6-phosphate etherase | BKM63_00035 | Not Available | Positive | 12639 - 13466 | 30163.9 |
| sodium:solute symporter | BKM63_00040 | Not Available | Positive | 13795 - 15303 | 56411.5 |
| beta-n-acetylglucosaminidase | BKM63_00045 | Not Available | Positive | 15381 - 18380 | 112646.0 |
| duf5009 domain-containing protein | BKM63_00050 | Not Available | Positive | 18453 - 19724 | 47317.4 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
