Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bate protein | BKM63_04785 | Not Available | Positive | 1035656 - 1036402 | 28294.3 |
| hypothetical protein | BKM63_04790 | Not Available | Negative | 1036482 - 1038026 | 57050.3 |
| 5-formyltetrahydrofolate cyclo-ligase | BKM63_04795 | Not Available | Negative | 1038300 - 1038869 | 21961.4 |
| succinylglutamate desuccinylase | BKM63_04800 | Not Available | Negative | 1038856 - 1039836 | 36337.2 |
| excinuclease abc subunit c | BKM63_04805 | Not Available | Positive | 1039974 - 1041767 | 68738.5 |
| patatin | BKM63_04810 | Not Available | Positive | 1041921 - 1044134 | 83130.5 |
| homogentisate 1,2-dioxygenase | BKM63_04815 | Not Available | Positive | 1044392 - 1045549 | 44554.9 |
| 4-hydroxyphenylpyruvate dioxygenase | BKM63_04820 | Not Available | Positive | 1045710 - 1046870 | 43908.3 |
| atp-dependent exonuclease | BKM63_04825 | Not Available | Positive | 1047169 - 1047939 | 29637.6 |
| tryptophan 2,3-dioxygenase | BKM63_04830 | Not Available | Positive | 1047939 - 1048880 | 37402.2 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
