Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Flavobacteriia
Order
Flavobacteriales
Family
Flavobacteriaceae
Genus
Flavobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Flavobacteriia |
| Order | Flavobacteriales |
| Family | Flavobacteriaceae |
| Genus | Flavobacterium |
| Species | Flavobacterium johnsoniae |
| Strain | CI04 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | No |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobe |
| Optimal temperature | 20 |
| Temperature range | Mesophilic |
| Habitat | Multiple |
| Biotic relationship | Free living |
| Host(s) | catfish, Pangasianodon hypophthalmus, Lates calcarifer |
| Cell arrangement | Not Available |
| Sporulation | Nonsporulating |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1795794 bp
Thymine Count
1790608 bp
Guanine Count
953729 bp
Cytosine Count
952046 bp
Genome Length
5492177 bp
Protein-coding Genes
4524 genes
Non-Coding Genes
73 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| very short patch repair endonuclease | BKM63_04480 | Not Available | Negative | 960941 - 961357 | 16805.3 |
| hypothetical protein | BKM63_04485 | Not Available | Negative | 961399 - 962130 | 28232.6 |
| Trna-met | Not Available | Not Available | Positive | 962254 - 962327 | Not Available |
| methylmalonyl-coa epimerase | BKM63_04495 | Not Available | Negative | 962474 - 962878 | 14873.0 |
| hypothetical protein | BKM63_04500 | Not Available | Negative | 962880 - 965246 | 91427.9 |
| hypothetical protein | BKM63_04505 | Not Available | Negative | 965206 - 966207 | 39528.9 |
| hypothetical protein | BKM63_04510 | Not Available | Positive | 966383 - 968071 | 65100.9 |
| nitrilase family protein | BKM63_04515 | Not Available | Negative | 968068 - 968835 | 29618.4 |
| susc/raga family protein | BKM63_04520 | Not Available | Positive | 969072 - 972227 | 114165.0 |
| glycan metabolism protein ragb | BKM63_04525 | Not Available | Positive | 972262 - 973791 | 56623.5 |
Pathways
15 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
